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 Post subject: how i can see the protein ligand complex
PostPosted: Mon Feb 27, 2017 7:10 am 

Joined: Thu Dec 15, 2016 4:05 pm
Posts: 1
After docking i have downloaded protein and ligand , it is giving only one file . how can i see my best docked protein ligand complex in visualization softwsares.


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 Post subject: Re: how i can see the protein ligand complex
PostPosted: Wed Mar 01, 2017 9:20 am 

Joined: Wed Oct 29, 2008 2:24 pm
Posts: 204
The downloaded file should contain the ligand docked to the protein.


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 Post subject: Re: how i can see the protein ligand complex
PostPosted: Thu Aug 24, 2017 5:55 pm 

Joined: Thu Jul 20, 2017 4:56 am
Posts: 6
Hi, is there a way to get a list atom contacts (protein-ligand) of runs other than the one with the lowest energy?

Thanks


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 Post subject: Re: how i can see the protein ligand complex
PostPosted: Mon Aug 28, 2017 4:30 pm 

Joined: Wed Oct 29, 2008 2:24 pm
Posts: 204
Both protein and ligand should be found in that file.


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