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 Post subject: frequency
PostPosted: Fri Mar 04, 2011 12:52 pm 

Joined: Wed Mar 02, 2011 5:21 pm
Posts: 2
dear sir,

i would like to know about "frequency" which is generated after docking .what is its importance.

what if i got a docking result with -7.37 kcal/mol of free energy and interaction surface is 887 and frequency 10% kindly explain me about this.


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 Post subject: Re: frequency
PostPosted: Fri Mar 04, 2011 1:07 pm 

Joined: Wed Mar 02, 2011 5:21 pm
Posts: 2
sivatma wrote:
dear sir,

i would like to know about "frequency" which is generated after docking .what is its importance.

what if i got a docking result with -7.37 kcal/mol of free energy and interaction surface is 887 and frequency 10%, kindly explain me about this.


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 Post subject: Re: frequency
PostPosted: Sat Mar 05, 2011 10:18 am 

Joined: Wed Oct 29, 2008 2:24 pm
Posts: 204
Frequency is a very important factor in the evaluation of the docking results. Docking calculations are independent docking runs and the frequency is the percent of the runs resulting in the same geometry. High frequency suggests reliable result, specific binding. For more detail, please see our publication detailinig this: http://www.dockingserver.com/web/references/


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