Molecular Docking Server
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the result image is not opening up
https://www.dockingserver.com/forum/viewtopic.php?f=5&t=37
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Author:  urprerak1 [ Fri Mar 19, 2010 1:12 am ]
Post subject:  the result image is not opening up

this is the java error console message that shows up. The image use to open before but now its not opening.

Java Plug-in 1.6.0_18
Using JRE version 1.6.0_18-b07 Java HotSpot(TM) Client VM
User home directory = C:\Users\PRERAK
----------------------------------------------------
c: clear console window
f: finalize objects on finalization queue
g: garbage collect
h: display this help message
l: dump classloader list
m: print memory usage
o: trigger logging
q: hide console
r: reload policy configuration
s: dump system and deployment properties
t: dump thread list
v: dump thread stack
x: clear classloader cache
0-5: set trace level to <n>
----------------------------------------------------


AstexViewer 3.0.99
Copyright (C) 1999-2008 Astex Therapeutics Ltd.
http://www.astex-therapeutics.com/AstexViewer
about to close property file
host = [www.dockingserver.com]
documentbase = [http://www.dockingserver.com/web/docking/43657/]
codebase = [http://www.dockingserver.com/]
java.lang.NegativeArraySizeException
at astex.Molecule.connect2(Molecule.java:836)
at astex.MoleculeIO.readPDB(MoleculeIO.java:1019)
at astex.MoleculeIO.read(MoleculeIO.java:213)
at astex.MoleculeIO.read(MoleculeIO.java:178)
at MoleculeViewerApplet.initialiseApplet(MoleculeViewerApplet.java:305)
at MoleculeViewerApplet.run(MoleculeViewerApplet.java:154)
at MoleculeViewerApplet.init(MoleculeViewerApplet.java:61)
at sun.plugin2.applet.Plugin2Manager$AppletExecutionRunnable.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
Exception: java.lang.NegativeArraySizeException
AstexViewer 3.0.99
Copyright (C) 1999-2008 Astex Therapeutics Ltd.
http://www.astex-therapeutics.com/AstexViewer
about to close property file
host = [www.dockingserver.com]
documentbase = [http://www.dockingserver.com/web/docking/44855/]
codebase = [http://www.dockingserver.com/]
java.lang.NegativeArraySizeException
at astex.Molecule.connect2(Molecule.java:836)
at astex.MoleculeIO.readPDB(MoleculeIO.java:1019)
at astex.MoleculeIO.read(MoleculeIO.java:213)
at astex.MoleculeIO.read(MoleculeIO.java:178)
at MoleculeViewerApplet.initialiseApplet(MoleculeViewerApplet.java:305)
at MoleculeViewerApplet.run(MoleculeViewerApplet.java:154)
at MoleculeViewerApplet.init(MoleculeViewerApplet.java:61)
at sun.plugin2.applet.Plugin2Manager$AppletExecutionRunnable.run(Unknown Source)
at java.lang.Thread.run(Unknown Source)
Exception: java.lang.NegativeArraySizeException

Author:  bikadi [ Fri Mar 19, 2010 7:33 am ]
Post subject:  Re: the result image is not opening up

This error sounds like that the current version of this Java applet and the stored version in your browser cache differs. Please first try it out in a different web browser you generally use - it should work there. If it works, clean the cache of your favorite web browser (delete temporary internet files). This should resolve your issue.

Zsolt

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